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  5. Spov3_chr1.02622

Spov3_chr1.02622 (flot2)


Aliases : flot2

Description : not classified


Gene families : OG0000172 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000172_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr1.02622
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_71

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0002.00224 PKT2, PKT1, KAT5 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0632.00001 No alias not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.05502 DAU1, TRM16 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.01545 MVQ1 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.02376 No alias not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.02477 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.02478 No alias not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004519 endonuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004521 RNA endonuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004540 RNA nuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0010333 terpene synthase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016891 RNA endonuclease activity, producing 5'-phosphomonoesters IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Spinacia oleracea GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!