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  5. Spov3_chr1.02436

Spov3_chr1.02436 (GGL3)


Aliases : GGL3

Description : not classified


Gene families : OG0000273 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000273_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr1.02436
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0084.00004 CRK8 not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_S11.00007 RLK4 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.03015 CHX15, ATCHX15 not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04784 FAF2, FTM5 not classified 0.14 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.02253 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.01692 No alias not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.04372 CRK8 not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004527 exonuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008408 3'-5' exonuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0010333 terpene synthase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016835 carbon-oxygen lyase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Spinacia oleracea GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!