Bra008817 (JAT3, ABCG6)

Aliases : JAT3, ABCG6

Description : jasmonic acid transporter *(JAT). subfamily ABCG transporter

Gene families : OG0012593 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra008817
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_1

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0003824	catalytic activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004497	monooxygenase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005506	iron ion binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008200	ion channel inhibitor activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008234	cysteine-type peptidase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009790	embryo development	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009793	embryo development ending in seed dormancy	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016247	channel regulator activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016248	channel inhibitor activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016491	oxidoreductase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016740	transferase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016757	glycosyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0017080	sodium channel regulator activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0019871	sodium channel inhibitor activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0020037	heme binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0022414	reproductive process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0046906	tetrapyrrole binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0046914	transition metal ion binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0099106	ion channel regulator activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0140678	molecular function inhibitor activity	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	111	263
IPR043926	ABCG_dom	292	348
IPR013525	ABC2_TM	422	630

External Links

No external refs found!

Bra008817 (JAT3, ABCG6)

Expression Profile

Co-expression Networks

Functional Annotation