Aliases : PP2CA, ATPP2CA, AHG3
Description : not classified
Gene families : OG0000129 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000129_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Spinacia oleracea (Sol) PCC: Spov3_chr1.01876 | |
Cluster | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_66 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Spov3_C0002.00218 | MED17 | not classified | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr1.00873 | No alias | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr1.04549 | GS1, GPP2 | component *(DDA) of CDDD substrate adaptor module of... | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr2.01539 | TOPP4 | not classified | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr2.05582 | GS1, GPP2 | component *(DDA) of CDDD substrate adaptor module of... | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr3.03976 | ATRGTA2, RGTA2 | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr4.00140 | GS1, GPP2 | component *(DDA) of CDDD substrate adaptor module of... | 0.1 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr6.02920 | PP2CA, ATPP2CA, AHG3 | not classified | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004420 | hydroxymethylglutaryl-CoA reductase (NADPH) activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0015936 | coenzyme A metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0033865 | nucleoside bisphosphate metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0033875 | ribonucleoside bisphosphate metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0034032 | purine nucleoside bisphosphate metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001932 | PPM-type_phosphatase-like_dom | 123 | 180 |
No external refs found! |