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  5. Spov3_chr1.01477

Spov3_chr1.01477


Description : not classified


Gene families : OG0001391 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001391_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr1.01477
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr2.03315 RH27 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.05442 CYL1, NAGLU not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.00262 TRAPPC9, TRS120,... not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.01517 gsl09, GSL09,... not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003677 DNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006006 glucose metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006094 gluconeogenesis IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006355 regulation of DNA-templated transcription IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006520 amino acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006528 asparagine metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006529 asparagine biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0007275 multicellular organism development IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009066 aspartate family amino acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009790 embryo development IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009793 embryo development ending in seed dormancy IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016831 carboxy-lyase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016874 ligase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019319 hexose biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0022414 reproductive process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032501 multicellular organismal process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0043565 sequence-specific DNA binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044283 small molecule biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046364 monosaccharide biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051252 regulation of RNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:2001141 regulation of RNA biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR019557 AminoTfrase-like_pln_mobile 83 271
No external refs found!