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Description : not classified
Gene families : OG0000004 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000004_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Spinacia oleracea (Sol) PCC: Spov3_chr1.01387 | |
| Cluster | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_237 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Spov3_C0001.00031 | HDG8 | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0001.00032 | No alias | not classified | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0002.00036 | ATPRP40A, PRP40A | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0003.00108 | ATPRP40A, PRP40A | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0004.00155 | TIC236, EMB2410 | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0006.00001 | No alias | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0006.00021 | ATPRP40A, PRP40A | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0007.00048 | NAC064, anac064 | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0007.00049 | No alias | not classified | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0010.00022 | ATPRP40A, PRP40A | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0017.00014 | ATPRP40A, PRP40A | not classified | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0033.00011 | SDHAF2 | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0065.00008 | TPLATE | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0158.00001 | ATPRP40A, PRP40A | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0181.00001 | BRH1 | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0246.00001 | ATPRP40A, PRP40A | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_S01.00171 | Kin7.5 | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_S02.00052 | BRH1 | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_S05.00041 | AtGUS1, GUS1 | not classified | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_S06.00001 | ATPRP40A, PRP40A | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_S08.00049 | ATPRP40A, PRP40A | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_S12.00048 | BRH1 | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_S14.00059 | PDC3 | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_S14.00060 | BRH1 | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.01489 | ATPRP40A, PRP40A | not classified | 0.1 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.01571 | No alias | not classified | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.01675 | ATPRP40A, PRP40A | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.01676 | NAC064, anac064 | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.02397 | NEDD1 | not classified | 0.1 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.03101 | ISU3, ATISU3 | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.04082 | BRH1 | not classified | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.04495 | No alias | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.01363 | No alias | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.01364 | No alias | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.01628 | BRH1 | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.01645 | BGLC1 | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.02027 | AOP3 | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.02854 | BRH1 | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.03961 | ATPRP40A, PRP40A | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.03962 | UBP3, ATUBP3 | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.04048 | PCFS4 | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.04382 | G2484-1, ATG2484-1 | not classified | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.04584 | BRH1 | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.05380 | COG0354 | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.05381 | HDG8 | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.05642 | ATNUDT15,... | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.00324 | No alias | not classified | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.00671 | No alias | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.01105 | No alias | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.01123 | No alias | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.02021 | AOP3 | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.02082 | No alias | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.02875 | No alias | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.03075 | No alias | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.03120 | ATPRP40A, PRP40A | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.03247 | No alias | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.03276 | BRH1 | not classified | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.03716 | ATATM2, ATM2, ABCB24 | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr4.00024 | ATPRP40A, PRP40A | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr4.00252 | SG1, IBM2, ASI1 | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr4.00670 | No alias | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr4.00800 | No alias | not classified | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr4.01007 | ATPRP40A, PRP40A | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr4.01249 | SCYL2B | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr4.01343 | ATPRP40A, PRP40A | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr4.01808 | No alias | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr4.02066 | PDP3 | not classified | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr4.02471 | No alias | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr4.03240 | GSL6, ATGSL6,... | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.02586 | No alias | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.02834 | No alias | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.03279 | No alias | subgroup ERF-III transcription factor | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.03515 | HDG8 | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.04140 | No alias | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.04181 | ATPRP40A, PRP40A | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.04182 | BRH1 | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr6.01878 | SPRT2, ATCFM3B, CFM3B | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr6.02167 | Fes1A | not classified | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr6.02619 | No alias | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr6.02620 | No alias | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004649 | poly(ADP-ribose) glycohydrolase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006282 | regulation of DNA repair | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0016043 | cellular component organization | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0030599 | pectinesterase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0035673 | oligopeptide transmembrane transporter activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0042545 | cell wall modification | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0042887 | amide transmembrane transporter activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0045229 | external encapsulating structure organization | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0051052 | regulation of DNA metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0071555 | cell wall organization | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0080134 | regulation of response to stress | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0080135 | regulation of cellular response to stress | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:1904680 | peptide transmembrane transporter activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |