Spov3_chr1.01340 (atARA7, ARA-7, ARA7,...)

Aliases : atARA7, ARA-7, ARA7, ATRABF2B, ATRAB-F2B, RAB-F2B, ATRAB5B, RABF2B

Description : F-class RAB GTPase. vesicle tethering small GTPase *(RAB5)

Gene families : OG0068800 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr1.01340
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_52

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004061	arylformamidase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004470	malic enzyme activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004471	malate dehydrogenase (decarboxylating) (NAD+) activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004568	chitinase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004672	protein kinase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005215	transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006022	aminoglycan metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006026	aminoglycan catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006030	chitin metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006032	chitin catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006040	amino sugar metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006468	protein phosphorylation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006568	tryptophan metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006569	tryptophan catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006576	biogenic amine metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006586	indolalkylamine metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006793	phosphorus metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006807	nitrogen compound metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006810	transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0007034	vacuolar transport	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008061	chitin binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0008150	biological_process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008324	monoatomic cation transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009063	amino acid catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009072	aromatic amino acid metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009074	aromatic amino acid family catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009987	cellular process	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0016020	membrane	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0016054	organic acid catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016301	kinase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0016310	phosphorylation	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016603	glutaminyl-peptide cyclotransferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016615	malate dehydrogenase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016740	transferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0017186	peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0018199	peptidyl-glutamine modification	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0019441	tryptophan catabolic process to kynurenine	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0019538	protein metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0022857	transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0030001	metal ion transport	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0030976	thiamine pyrophosphate binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0032182	ubiquitin-like protein binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0036211	protein modification process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0040008	regulation of growth	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0042180	cellular ketone metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0042430	indole-containing compound metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0042436	indole-containing compound catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0042537	benzene-containing compound metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0043130	ubiquitin binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0043170	macromolecule metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0043412	macromolecule modification	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0043565	sequence-specific DNA binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0044237	cellular metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0044282	small molecule catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0045927	positive regulation of growth	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0046348	amino sugar catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0046395	carboxylic acid catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0048518	positive regulation of biological process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0050997	quaternary ammonium group binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051179	localization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051234	establishment of localization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0055085	transmembrane transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0070189	kynurenine metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1901071	glucosamine-containing compound metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1901072	glucosamine-containing compound catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1901565	organonitrogen compound catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1901606	alpha-amino acid catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:1901681	sulfur compound binding	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	12	171

External Links

No external refs found!

Spov3_chr1.01340 (atARA7, ARA-7, ARA7,...)

Expression Profile

Co-expression Networks

Functional Annotation