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  5. Spov3_chr1.01197

Spov3_chr1.01197


Description : not classified


Gene families : OG0000021 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr1.01197
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_136

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr2.04501 No alias not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04875 No alias not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.02930 No alias not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.04162 No alias not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.00232 No alias not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.03023 No alias not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.04250 NRPC2 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.04446 No alias not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.02610 DML2 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0010333 terpene synthase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016835 carbon-oxygen lyase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0051536 iron-sulfur cluster binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0051540 metal cluster binding IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR004242 Transposase_21 1 43
No external refs found!