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  5. Spov3_chr1.01149

Spov3_chr1.01149 (MVP17)


Aliases : MVP17

Description : not classified


Gene families : OG0000394 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000394_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr1.01149
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Spov3_S07.00015 RPA3A not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.01899 CHY1 GET3-recruitment component *(GET4) of GET4-GET5 scaffold... 0.11 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.02403 No alias not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.01862 No alias not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0001510 RNA methylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006694 steroid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008170 N-methyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008202 steroid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008649 rRNA methyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016125 sterol metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016126 sterol biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0031167 rRNA methylation IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0070475 rRNA base methylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!