Aliases : DOT2, MDF
Description : not classified
Gene families : OG0000076 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000076_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Spinacia oleracea (Sol) PCC: Spov3_chr1.01126 | |
Cluster | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_46 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Spov3_C0005.00091 | No alias | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_C0012.00079 | SHM2 | not classified | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_C0046.00001 | No alias | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_C0056.00006 | DOT2, MDF | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_S17.00003 | PPRD2 | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr1.02626 | ATP6-2 | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr2.03091 | NFA3, NAP1;3, NFA03 | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr2.03195 | DOT2, MDF | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr2.05673 | No alias | not classified | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr6.03133 | MEE20 | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000723 | telomere maintenance | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0003678 | DNA helicase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0004386 | helicase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0006281 | DNA repair | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0006974 | DNA damage response | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0006996 | organelle organization | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0032200 | telomere organization | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0032502 | developmental process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0033554 | cellular response to stress | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0048364 | root development | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0048367 | shoot system development | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0048731 | system development | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0048856 | anatomical structure development | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0051276 | chromosome organization | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0051716 | cellular response to stimulus | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0099402 | plant organ development | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Spinacia oleracea GO terms from Neighborhoods |
No InterPro domains available for this sequence
No external refs found! |