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  5. Spov3_chr1.00660

Spov3_chr1.00660 (CHR24)


Aliases : CHR24

Description : chromatin remodeling factor *(ERCC6)


Gene families : OG0069651 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr1.00660
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_77


Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0140658 ATP-dependent chromatin remodeler activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0000775 chromosome, centromeric region IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0000786 nucleosome IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003677 DNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003678 DNA helicase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003682 chromatin binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003690 double-stranded DNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003774 cytoskeletal motor activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003777 microtubule motor activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003883 CTP synthase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003887 DNA-directed DNA polymerase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004055 argininosuccinate synthase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004386 helicase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004797 thymidine kinase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005634 nucleus IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005694 chromosome IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006259 DNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006260 DNA replication IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006270 DNA replication initiation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006275 regulation of DNA replication IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006281 DNA repair IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006298 mismatch repair IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006325 chromatin organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006334 nucleosome assembly IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006338 chromatin remodeling IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006479 protein methylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006525 arginine metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006526 arginine biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006950 response to stress IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006974 DNA damage response IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006996 organelle organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0007017 microtubule-based process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0007018 microtubule-based movement IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0007049 cell cycle IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008017 microtubule binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008092 cytoskeletal protein binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008150 biological_process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008168 methyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008213 protein alkylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009064 glutamine family amino acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0015631 tubulin binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016043 cellular component organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016570 histone modification IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016571 histone methylation IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016874 ligase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016887 ATP hydrolysis activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0018022 peptidyl-lysine methylation IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0018024 obsolete histone lysine N-methyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0018205 peptidyl-lysine modification IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019136 deoxynucleoside kinase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019205 nucleobase-containing compound kinase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019206 nucleoside kinase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0022607 cellular component assembly IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0030983 mismatched DNA binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0032993 protein-DNA complex IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0033554 cellular response to stress IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0034061 DNA polymerase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0034728 nucleosome organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0034968 histone lysine methylation IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0043138 3'-5' DNA helicase activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0043226 organelle IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0043229 intracellular organelle IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043933 protein-containing complex organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044237 cellular metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044238 primary metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0044877 protein-containing complex binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0050896 response to stimulus IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051052 regulation of DNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051276 chromosome organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051716 cellular response to stimulus IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0065003 protein-containing complex assembly IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0065004 protein-DNA complex assembly IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071704 organic substance metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071824 protein-DNA complex organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071840 cellular component organization or biogenesis IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0098687 chromosomal region IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140299 small molecule sensor activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140612 DNA damage sensor activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140664 ATP-dependent DNA damage sensor activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000330 SNF2_N 424 726
IPR001650 Helicase_C 777 889
No external refs found!