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  5. Spov3_chr1.00520

Spov3_chr1.00520


Description : not classified


Gene families : OG0001639 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001639_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr1.00520
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Bra005821 No alias not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005694 chromosome IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032502 developmental process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0048364 root development IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0048367 shoot system development IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0048731 system development IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0048856 anatomical structure development IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0099402 plant organ development IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR046848 E_motif 529 591
IPR002885 Pentatricopeptide_rpt 409 457
IPR002885 Pentatricopeptide_rpt 104 153
IPR002885 Pentatricopeptide_rpt 308 356
IPR002885 Pentatricopeptide_rpt 485 509
IPR002885 Pentatricopeptide_rpt 208 235
IPR002885 Pentatricopeptide_rpt 180 206
IPR032867 DYW_dom 627 714
No external refs found!