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  5. Spov3_chr1.00510

Spov3_chr1.00510 (CRB, CSP41B, HIP1.3)


Aliases : CRB, CSP41B, HIP1.3

Description : endoribonuclease *(CSP41)


Gene families : OG0003092 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003092_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr1.00510
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Bra018565 CRB, CSP41B, HIP1.3 endoribonuclease *(CSP41) 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Bra020030 CRB, CSP41B, HIP1.3 endoribonuclease *(CSP41) 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003824 catalytic activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004089 carbonate dehydratase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004176 ATP-dependent peptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004356 glutamine synthetase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004618 phosphoglycerate kinase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004807 triose-phosphate isomerase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005261 monoatomic cation channel activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005575 cellular_component IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005886 plasma membrane IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006082 organic acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006091 generation of precursor metabolites and energy IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006520 amino acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006541 glutamine metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006542 glutamine biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008152 metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009064 glutamine family amino acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0009521 photosystem IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0009522 photosystem I IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0009523 photosystem II IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0009538 photosystem I reaction center IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0009654 photosystem II oxygen evolving complex IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0010206 photosystem II repair IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0010207 photosystem II assembly IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0015252 proton channel activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0015979 photosynthesis IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016211 ammonia ligase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016491 oxidoreductase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016853 isomerase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016859 cis-trans isomerase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016860 intramolecular oxidoreductase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016874 ligase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016887 ATP hydrolysis activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019752 carboxylic acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0019898 extrinsic component of membrane IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0030091 protein repair IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0030554 adenyl nucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032787 monocarboxylic acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0034357 photosynthetic membrane IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0042651 thylakoid membrane IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043436 oxoacid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044237 cellular metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044281 small molecule metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0050661 NADP binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0051287 NAD binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0070402 NADPH binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0098796 membrane protein complex IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:1902494 catalytic complex IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:1990204 oxidoreductase complex IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001509 Epimerase_deHydtase 59 276
No external refs found!