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Aliases : CHA18, CHR18
Description : not classified
Gene families : OG0000077 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000077_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Spinacia oleracea (Sol) PCC: Spov3_S16.00009 | |
| Cluster | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_69 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Spov3_C0021.00031 | BAL, SNC1 | associated component *(SAP18) of histone deacetylase machineries | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0039.00005 | No alias | not classified | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0801.00001 | ATSAP18, SAP18 | associated component *(SAP18) of histone deacetylase machineries | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_S06.00041 | No alias | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.02310 | ATSAP18, SAP18 | associated component *(SAP18) of histone deacetylase machineries | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.02927 | CHA18, CHR18 | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.03416 | ATSAP18, SAP18 | associated component *(SAP18) of histone deacetylase machineries | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.01593 | ATSAP18, SAP18 | associated component *(SAP18) of histone deacetylase machineries | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.03469 | ATSAP18, SAP18 | associated component *(SAP18) of histone deacetylase machineries | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr4.00102 | ATSAP18, SAP18 | associated component *(SAP18) of histone deacetylase machineries | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.03208 | WAK1, PRO25, AtWAK1 | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.04097 | ATU2AF65B, U2AF65b | not classified | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000271 | polysaccharide biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0004066 | asparagine synthase (glutamine-hydrolyzing) activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006528 | asparagine metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006529 | asparagine biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0009250 | glucan biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016759 | cellulose synthase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0030243 | cellulose metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0030244 | cellulose biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0044042 | glucan metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0051273 | beta-glucan metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0051274 | beta-glucan biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |