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  5. Bra008592

Bra008592 (PEP12P, SYP21, PEP12,...)


Aliases : PEP12P, SYP21, PEP12, ATPEP12, ATSYP21

Description : Qa-type SYP2-group component of SNARE membrane fusion complex


Gene families : OG0007320 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra008592
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_19


Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004519 endonuclease activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0005984 disaccharide metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0005991 trehalose metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0005992 trehalose biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006259 DNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006308 DNA catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009057 macromolecule catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009311 oligosaccharide metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009312 oligosaccharide biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016051 carbohydrate biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019439 aromatic compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034655 nucleobase-containing compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044248 cellular catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044270 cellular nitrogen compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046351 disaccharide biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046700 heterocycle catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901361 organic cyclic compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 222 274
IPR006011 Syntaxin_N 37 135
No external refs found!