Description : not classified
Gene families : OG0000091 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000091_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Spinacia oleracea (Sol) PCC: Spov3_S11.00014 | |
Cluster | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_69 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Spov3_C0002.00113 | No alias | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_C0002.00184 | RUK, EMB3013 | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_S01.00057 | No alias | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_S05.00005 | EMB2759 | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr1.01253 | No alias | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr1.01370 | RBL | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr2.04338 | TGH | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr3.01692 | No alias | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr3.02795 | MAP65-5 | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr3.03016 | PBL25 | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr5.01679 | TGH | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr5.03498 | No alias | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004066 | asparagine synthase (glutamine-hydrolyzing) activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0006528 | asparagine metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0006529 | asparagine biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0008652 | amino acid biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:1901605 | alpha-amino acid metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR025724 | GAG-pre-integrase_dom | 338 | 407 |
No external refs found! |