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  5. Spov3_S05.00012

Spov3_S05.00012


Description : not classified


Gene families : OG0000593 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000593_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_S05.00012
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_62

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr6.01581 No alias not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005618 cell wall IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006073 obsolete cellular glucan metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0010629 negative regulation of gene expression IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016757 glycosyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0030312 external encapsulating structure IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0031047 regulatory ncRNA-mediated gene silencing IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0048046 apoplast IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR041588 Integrase_H2C2 267 321
IPR041577 RT_RNaseH_2 48 142
IPR023780 Chromo_domain 545 590
No external refs found!