Spov3_C1346.00001 (STL1)


Aliases : STL1

Description : not classified


Gene families : OG0000029 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000029_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_C1346.00001
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0037.00001 IF1 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0058.00012 STL1 not classified 0.12 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
ECC Pair graph <a href="/sequence/view/83572" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/83572">Spov3_C0170.00003</a></td> <td>RIP1, MORF8</td> <td>not classified</td> <td>0.04</td> <td>OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol</td> <td><a href="/ecc/graph_pair/119318" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/84377/3/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/83573" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/83573">Spov3_C0170.00004</a></td> <td><span class="text-muted">No alias</span></td> <td>not classified</td> <td>0.04</td> <td>OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol</td> <td><a href="/ecc/graph_pair/119344" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/84377/3/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/83635" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/83635">Spov3_C0224.00004</a></td> <td>BIG2</td> <td>not classified</td> <td>0.05</td> <td>OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol</td> <td><a href="/ecc/graph_pair/119396" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/84377/3/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/83782" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/83782">Spov3_C0345.00009</a></td> <td>STL1</td> <td>not classified</td> <td>0.05</td> <td>OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol</td> <td><a href="/ecc/graph_pair/119442" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/84377/3/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/83822" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/83822">Spov3_C0398.00004</a></td> <td>BIG2</td> <td>not classified</td> <td>0.06</td> <td>OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol</td> <td><a href="/ecc/graph_pair/119470" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/84377/3/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/83852" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/83852">Spov3_C0415.00005</a></td> <td>STL1</td> <td>not classified</td> <td>0.03</td> <td>OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol</td> <td><a href="/ecc/graph_pair/119506" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/84377/3/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/83904" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/83904">Spov3_C0491.00005</a></td> <td><span class="text-muted">No alias</span></td> <td>not classified</td> <td>0.04</td> <td>OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol</td> <td><a href="/ecc/graph_pair/119550" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/84377/3/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/84016" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/84016">Spov3_C0623.00002</a></td> <td>STL1</td> <td>not classified</td> <td>0.04</td> <td>OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol</td> <td><a href="/ecc/graph_pair/119780" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/84377/3/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/84025" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/84025">Spov3_C0625.00008</a></td> <td><span class="text-muted">No alias</span></td> <td>not classified</td> <td>0.06</td> <td>OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol</td> <td><a href="/ecc/graph_pair/119838" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/84377/3/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/84045" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/84045">Spov3_C0637.00004</a></td> <td><span class="text-muted">No alias</span></td> <td>not classified</td> <td>0.03</td> <td>OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol</td> <td><a href="/ecc/graph_pair/119876" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/84377/3/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/84097" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/84097">Spov3_C0715.00006</a></td> <td>BIG2</td> <td>not classified</td> <td>0.17</td> <td>OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol</td> <td><a href="/ecc/graph_pair/119954" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/84377/3/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/84124" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/84124">Spov3_C0776.00004</a></td> <td><span class="text-muted">No alias</span></td> <td>not classified</td> <td>0.04</td> <td>OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol</td> <td><a href="/ecc/graph_pair/120004" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/84377/3/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/84157" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/84157">Spov3_C0861.00001</a></td> <td>STL1</td> <td>not classified</td> <td>0.07</td> <td>OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol</td> <td><a href="/ecc/graph_pair/120030" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/84377/3/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/84228" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/84228">Spov3_C1011.00001</a></td> <td>DSC2</td> <td>not classified</td> <td>0.07</td> <td>OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol</td> <td><a href="/ecc/graph_pair/120088" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/84377/3/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/84270" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/84270">Spov3_C1102.00002</a></td> <td><span class="text-muted">No alias</span></td> <td>not classified</td> <td>0.04</td> <td>OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol</td> <td><a href="/ecc/graph_pair/120106" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/84377/3/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/84281" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/84281">Spov3_C1118.00002</a></td> <td><span class="text-muted">No alias</span></td> <td>not classified</td> <td>0.04</td> <td>OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol</td> <td><a href="/ecc/graph_pair/120174" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/84377/3/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/84294" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/84294">Spov3_C1141.00007</a></td> <td><span class="text-muted">No alias</span></td> <td>not classified</td> <td>0.04</td> <td>OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol</td> <td><a href="/ecc/graph_pair/120214" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/84377/3/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/84334" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/84334">Spov3_C1263.00001</a></td> <td>BIG2</td> <td>not classified</td> <td>0.05</td> <td>OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol</td> <td><a href="/ecc/graph_pair/120304" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/84377/3/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/84344" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/84344">Spov3_C1290.00001</a></td> <td><span class="text-muted">No alias</span></td> <td>not classified</td> <td>0.04</td> <td>OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol</td> <td><a href="/ecc/graph_pair/120322" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/84377/3/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/84381" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/84381">Spov3_C1351.00001</a></td> <td>BIG2</td> <td>not classified</td> <td>0.12</td> <td>OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol</td> <td><a href="/ecc/graph_pair/120353" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/84377/3/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/84419" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/84419">Spov3_C1456.00001</a></td> <td>BIG2</td> <td>not classified</td> <td>0.04</td> <td>OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol</td> <td><a href="/ecc/graph_pair/120355" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/84377/3/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/84444" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/84444">Spov3_C1813.00002</a></td> <td><span class="text-muted">No alias</span></td> <td>not classified</td> <td>0.04</td> <td>OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol</td> <td><a href="/ecc/graph_pair/120357" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/84377/3/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/86926" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/86926">Spov3_chr1.01250</a></td> <td>BIG2</td> <td>not classified</td> <td>0.05</td> <td>OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol</td> <td><a href="/ecc/graph_pair/120359" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/84377/3/1" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> </tbody> </table> </div> <br> <h3 class="banner-blue" id="annotation">Functional Annotation</h3> <div class="panel with-nav-tabs panel-default"> <div class="panel-heading"> <ul class="nav nav-tabs"> <li class="active"><a href="#tab1default" data-toggle="tab">GO</a></li> <li><a href="#tab2default" data-toggle="tab">Predicted GO</a></li> <li><a href="#tab3default" data-toggle="tab">InterPro</a></li> </ul> </div> <div> <div class="tab-content"> <div class="tab-pane fade in active" id="tab1default"> <div class="table-responsive"> <table class="table table-striped table-fixed" id="go_table"> <thead> <tr> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Type</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/go" data-target="#helpModal">GO</abbr> Term</th> <th class="col-xs-6" data-sort="string-ins"><span class="sort-icon"></span>Name</th> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Evidence</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span>Source</th> </tr> </thead> <tbody> <tr> <td class="col-xs-12"><p>No GO annotation available for this sequence</p></td> </tr> </tbody> </table> </div> <div class="panel-body"> <a href="#" id="go_toggle">Toggle parental</a> </div> </div> <div class="tab-pane fade" id="tab2default"> <div class="table-responsive"> <table class="table table-striped table-fixed" id="predicted_go_table"> <thead> <tr> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Type</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/go" data-target="#helpModal">GO</abbr> Term</th> <th class="col-xs-6" data-sort="string-ins"><span class="sort-icon"></span>Name</th> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Evidence</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span>Source</th> </tr> </thead> <tbody> <tr> <td class="col-xs-12"><p>No Predicted GO terms available for this sequence</p></td> </tr> </tbody> </table> </div> </div> <div class="tab-pane fade" id="tab3default"> <div class="panel-body"> <p>No InterPro domains available for this sequence</p> </div> </div> </div> </div> </div> <div class="row"> <div class="col-lg-12 col-md-12 col-sm-12"> <div class="panel panel-default"> <div class="panel-heading" id="links">External Links</div> <div class="table-responsive"> <table class="table table-striped table-separated"> <tbody> <tr> <td><em>No external refs found!</em></td> </td> </tr> </tbody> </table> </div> </div> </div> </div> <div class="modal" id="profileModal" tabindex="-1" role="dialog" aria-labelledby="profileModalLabel"> <div class="modal-dialog" 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