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Aliases : CBL1, ATCBL1, SCABP5
Description : not classified
Gene families : OG0000023 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000023_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Spinacia oleracea (Sol) PCC: Spov3_C0928.00003 | |
| Cluster | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_21 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Spov3_C0037.00012 | IEF | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0037.00027 | bHLH60 | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0037.00033 | No alias | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0058.00020 | CBL1, ATCBL1, SCABP5 | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0415.00001 | ATIPT4, IPT4 | not classified | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0516.00005 | ATIPT4, IPT4 | not classified | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0528.00002 | ATIPT4, IPT4 | not classified | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0701.00004 | ATIPT4, IPT4 | not classified | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C1072.00004 | NPH4, MSG1,... | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C1087.00004 | SEC24A, ERMO2, AtSEC24A | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C1198.00001 | CBL1, ATCBL1, SCABP5 | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C1286.00001 | bHLH60 | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C1730.00001 | CBL1, ATCBL1, SCABP5 | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.03170 | No alias | not classified | 0.1 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.03166 | bHLH60 | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.03862 | CBL1, ATCBL1, SCABP5 | not classified | 0.1 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0009055 | electron transfer activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0009521 | photosystem | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0009767 | photosynthetic electron transport chain | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0009772 | photosynthetic electron transport in photosystem II | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016168 | chlorophyll binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0019684 | photosynthesis, light reaction | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0019829 | ATPase-coupled monoatomic cation transmembrane transporter activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0022853 | active monoatomic ion transmembrane transporter activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0022900 | electron transport chain | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0032991 | protein-containing complex | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0033178 | proton-transporting two-sector ATPase complex, catalytic domain | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0042625 | ATPase-coupled ion transmembrane transporter activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0044769 | ATPase activity, coupled to transmembrane movement of ions, rotational mechanism | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0045156 | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0046961 | proton-transporting ATPase activity, rotational mechanism | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0098796 | membrane protein complex | IEP | Spinacia oleracea GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |