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  5. Bra000842

Bra000842 (AFB1, ATGRH1, GRH1)


Aliases : AFB1, ATGRH1, GRH1

Description : substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)


Gene families : OG0014122 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra000842
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_28


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004518 nuclease activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004519 endonuclease activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004521 RNA endonuclease activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004540 RNA nuclease activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005506 iron ion binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008146 sulfotransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016787 hydrolase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016891 RNA endonuclease activity, producing 5'-phosphomonoesters IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046914 transition metal ion binding IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR041101 Transp_inhibit 62 108
IPR041567 COI1_F-box 5 43
No external refs found!