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  5. Bra008446

Bra008446 (PRE, NUP96, MOS3, SAR3)


Aliases : PRE, NUP96, MOS3, SAR3

Description : scaffold nucleoporin of nuclear pore complex


Gene families : OG0004453 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004453_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra008446


Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEA Interproscan
BP GO:0006913 nucleocytoplasmic transport IEA Interproscan
MF GO:0017056 structural constituent of nuclear pore IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006555 methionine metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006790 sulfur compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009066 aspartate family amino acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901605 alpha-amino acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR021967 Nup98_C 523 801
IPR007230 Nup98_auto-Pept-S59_dom 27 164
No external refs found!