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  5. Spov3_C0643.00005

Spov3_C0643.00005 (YCF2.2)


Aliases : YCF2.2

Description : regulatory component *(YCF2) of AAA-ATPase motor complex


Gene families : OG0000591 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000591_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_C0643.00005
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0091.00015 YCF2.2 regulatory component *(YCF2) of AAA-ATPase motor complex 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0297.00004 YCF2.2 regulatory component *(YCF2) of AAA-ATPase motor complex 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0414.00004 YCF2.2 regulatory component *(YCF2) of AAA-ATPase motor complex 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0414.00005 YCF2.2 not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0526.00004 YCF2.2 regulatory component *(YCF2) of AAA-ATPase motor complex 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0662.00002 YCF2.2 regulatory component *(YCF2) of AAA-ATPase motor complex 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.02561 YCF2.2 regulatory component *(YCF2) of AAA-ATPase motor complex 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004190 aspartic-type endopeptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009767 photosynthetic electron transport chain IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019684 photosynthesis, light reaction IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0070001 aspartic-type peptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 970 1130
IPR008543 Uncharacterised_Ycf2 424 616
IPR008543 Uncharacterised_Ycf2 1 70
IPR008543 Uncharacterised_Ycf2 70 423
IPR008543 Uncharacterised_Ycf2 616 820
No external refs found!