Heatmap: Cluster_40 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 260 uE m-2 s-1
Light: 195 uE m-2 s-1
Light: 130 uE m-2 s-1 (Control)
Light: 65 uE m-2 s-1
Photoperiod: L24
Photoperiod: L18D6
Photoperiod: L13D11 (Control)
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C (Control)
Temperature: 25°C
Temperature: 30°C
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
-0.56 -0.34 -0.3 -0.06 0.69 -0.42 -0.75 -0.48 0.2 0.02 -0.06 -0.16 -1.05 -1.92 -0.35 -0.29 -0.34 -2.53 -0.0 0.21 0.06 -0.15 -1.6 -0.25 -0.37 0.12 -0.02 -0.04 1.07 2.19
0.01 0.24 -0.01 -0.07 0.71 -0.1 -0.15 -1.61 0.81 0.74 -0.04 -0.34 -1.83 -2.49 -1.05 -0.79 -1.24 -2.71 0.05 0.15 -0.19 -0.05 -1.13 0.0 -0.18 0.05 -0.1 -0.04 1.25 1.65
0.08 0.27 -0.38 -0.49 0.94 -0.31 -1.33 -2.15 0.23 0.33 -0.25 -0.64 -1.48 -1.63 -0.89 -0.59 -0.85 -1.19 0.07 0.11 0.08 -0.31 -1.14 -0.12 -0.48 0.27 0.07 -0.29 0.83 2.38
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
-0.62 -0.38 -1.35 -1.34 -0.07 -0.2 -0.75 -0.92 -2.07 -2.29 -0.76 -1.78 -1.17 1.5 -1.7 -0.76 -3.13 0.65 -0.62 -0.82 -1.27 -1.36 1.64 -1.48 -2.26 -1.16 -1.74 -1.08 -1.32 3.37
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
-4.29 0.12 1.83 -3.24 -4.4 -2.51 - - - - - -4.36 -2.34 - - - - - - -4.48 -1.94 - -2.61 -2.85 -3.52 - -3.69 1.52 -2.21 4.38
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
-1.6 -2.39 -3.3 -3.56 -3.05 1.55 -2.52 -3.14 -3.14 -2.83 -2.9 -3.14 -0.35 2.51 -0.22 -0.75 -1.34 0.29 -1.45 -2.09 0.27 -2.24 0.13 -3.82 -4.08 -0.58 -1.8 -2.93 -1.1 3.48
0.26 -0.49 -0.88 -0.31 -1.29 1.42 0.39 0.05 -0.34 -0.72 -1.56 -0.55 -0.64 0.42 0.16 0.06 -1.51 -0.76 -0.62 -0.6 -1.84 -0.93 -3.0 -2.76 -3.3 -2.15 -2.22 -1.28 1.01 3.08
0.49 -0.09 -0.13 -0.93 0.47 0.76 0.55 -0.67 -0.08 -0.46 -0.85 -0.45 -1.73 0.91 -0.77 -0.18 -1.54 -0.44 -0.07 -0.77 -1.48 -0.57 -0.71 -1.61 -2.24 -1.46 -1.05 -0.31 1.17 2.52
-0.01 -0.37 -0.79 -1.01 0.0 1.4 0.14 0.07 -0.53 -0.7 -0.68 -0.27 -0.17 0.69 -0.55 0.1 -1.41 -0.04 -0.32 -0.47 -1.72 -0.58 0.41 -1.34 -1.69 -1.65 -1.24 -0.48 0.41 2.51
2.44 - - - 2.12 - - - - - - - - - -13.73 - - - - - - - - - - - 2.13 - - 3.99
- - - 3.22 - - - - - - - - - - - - - - - - - - - - - - - - - 4.37
-0.05 -0.12 -1.01 -0.16 -1.2 0.06 -0.47 0.1 -0.32 0.1 0.01 -0.25 0.23 0.73 -0.45 -0.29 -0.18 -0.04 -0.84 -0.16 -0.31 0.32 0.6 -1.35 -0.71 -0.46 -0.51 -0.58 0.18 2.08
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
-0.14 0.38 0.23 -0.8 -0.86 0.17 -0.58 - 0.21 0.23 -1.11 -0.28 -2.0 0.56 0.29 0.32 -2.06 1.35 -1.23 -2.31 -1.38 -2.24 - 0.42 - - -0.18 -0.98 0.9 2.86
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
-0.19 0.16 -0.14 0.06 -0.07 0.1 -0.15 -0.62 0.53 -0.68 -0.49 -0.27 -0.11 -0.42 -0.15 -0.08 0.16 -0.47 -0.31 -0.51 0.13 0.15 -0.94 -0.11 -0.46 -0.46 -0.22 -0.24 1.09 1.61
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
-1.26 -1.39 -1.21 -1.59 -2.31 1.21 -0.58 -1.82 -1.92 -2.16 -2.41 -2.06 -1.67 -0.49 0.31 -0.3 -1.31 -0.49 -2.12 -2.14 -2.91 -1.59 -1.91 -5.31 -4.31 -2.89 -1.99 -3.16 0.36 4.07
- 0.19 0.01 - -0.41 -1.12 - - - - -1.77 -0.05 0.37 -1.84 - -1.9 -1.05 -1.16 -1.03 - - 0.59 - - - -0.54 -0.89 -0.74 - 4.23
0.04 -0.27 -0.13 -0.35 0.32 0.17 0.15 -0.69 -0.65 0.16 -0.89 -1.68 0.11 0.8 -0.27 -2.18 -0.66 0.93 -1.57 -0.1 -0.73 -0.42 0.07 -0.47 -1.13 -1.16 0.03 0.03 0.11 2.29
0.32 -0.01 -0.02 -0.17 -0.1 0.91 0.03 -0.6 -0.92 -0.45 -0.79 -0.55 -0.82 0.94 -0.23 -0.17 -0.45 -0.75 -0.71 -0.52 -0.91 -0.51 -0.58 -0.71 -1.54 -1.03 -1.46 -0.64 0.99 2.5
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
-0.28 -0.23 0.03 0.11 -1.16 -0.17 -0.31 -0.9 0.03 -0.33 -0.02 -0.21 0.07 -0.18 0.1 0.23 0.26 -0.05 -0.2 -0.19 -0.29 -0.18 -1.72 -0.72 -0.68 -0.35 -0.36 -0.73 1.38 1.92
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
-0.39 -0.68 0.64 0.58 -1.01 0.67 -0.63 -1.19 -0.63 -0.3 -0.85 -0.91 -2.86 0.78 -0.22 -0.03 -0.95 1.4 0.01 -1.38 -0.8 -0.51 -0.9 -1.54 -2.11 -0.86 -0.47 -0.82 1.21 2.34
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
- - - - - - - - - - - - 3.08 - - - - - - - - - - - - - - - - 4.43
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
-1.07 -2.06 0.26 1.0 -4.93 0.71 -0.49 -0.72 -0.55 -0.69 -0.44 -0.97 -0.9 0.82 0.93 0.63 0.42 -2.25 -0.31 -0.22 -0.55 -0.63 -0.83 -1.31 -1.63 -0.81 -1.38 -1.47 0.51 2.64
-0.53 -1.87 -0.11 0.45 -2.88 0.61 -0.34 -0.92 -1.4 -1.05 -0.97 -1.09 -1.58 0.92 -0.18 -0.1 -0.13 1.41 0.01 -0.02 -1.22 -0.42 -0.47 -1.12 -2.05 -1.07 -1.82 -1.52 0.99 2.73
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
-0.77 -0.73 -0.03 0.56 -0.78 0.9 -0.33 -0.66 -0.72 0.17 -0.37 0.06 -1.94 0.67 -0.5 -0.13 -0.58 -1.23 -0.89 -1.23 -1.08 -0.82 -1.61 -1.84 -2.17 -0.56 -1.47 0.14 0.93 2.91
-0.94 -1.24 -1.87 -0.83 -1.01 0.11 -3.44 -4.83 -3.93 -2.6 -2.81 -1.86 -2.35 0.78 - -1.25 -4.04 -1.82 -2.95 -2.13 -2.05 -2.4 - - -3.15 - -1.96 0.06 0.69 4.28
-1.89 -0.68 -0.52 1.0 -1.46 0.66 -1.13 -0.82 -0.83 -1.02 -0.62 -1.09 -2.69 0.17 -1.07 -1.58 -1.85 -3.0 -1.49 -1.65 -1.8 -1.58 -3.11 -3.01 -3.25 -1.31 -3.02 -0.02 0.82 3.79
-0.22 0.28 0.46 -0.95 -0.6 0.25 -1.09 0.96 -0.86 -0.32 -1.53 -0.27 - 0.98 -0.34 0.15 -1.54 -2.51 -1.15 -0.27 -0.21 -0.6 -1.43 -1.02 -3.7 -0.28 -0.68 0.45 1.13 2.61
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
0.4 -0.27 -0.14 -0.26 0.0 0.84 -1.75 -1.73 -1.75 -0.47 -0.96 0.08 0.01 0.63 0.39 -0.82 -1.31 0.42 -1.11 -0.56 -0.28 -1.14 0.73 -0.9 -1.8 -0.28 -0.44 0.26 0.47 2.3
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
-0.27 -0.69 -0.29 0.54 0.16 -0.18 -0.49 -0.03 -0.11 0.5 -0.05 -0.27 -0.43 -1.33 -0.18 -0.77 0.27 -1.08 -0.19 0.19 0.43 -0.83 -0.11 0.11 -0.15 -0.04 -0.55 0.47 0.72 1.41
0.46 -0.02 -0.19 -0.88 -0.83 1.65 -0.52 -1.93 -1.47 -0.43 -1.66 -1.2 -3.19 1.21 -0.08 -0.43 -1.17 -0.02 -1.15 -1.26 -1.76 -0.42 -0.87 -2.36 -2.96 -1.47 -2.02 -0.84 1.22 2.98
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
0.46 -0.02 -0.19 -0.88 -0.83 1.65 -0.52 -1.93 -1.47 -0.43 -1.66 -1.2 -3.19 1.21 -0.08 -0.43 -1.17 -0.02 -1.15 -1.26 -1.76 -0.42 -0.87 -2.36 -2.96 -1.47 -2.02 -0.84 1.22 2.98
-0.12 0.85 -0.68 -1.41 -4.61 -1.97 -0.53 -0.15 -0.6 -0.36 -0.55 -0.85 -0.03 - -1.13 -1.3 -0.4 -2.76 1.36 0.76 -0.37 0.09 -1.72 -1.46 -1.08 0.44 -0.37 -1.04 0.28 2.98
-0.04 -0.79 0.17 -0.52 -0.41 -1.05 -0.42 -0.93 -1.33 -2.88 - -0.98 -1.24 0.61 -2.01 - -1.22 0.21 - - 0.32 -0.55 1.4 - -2.1 -1.44 -0.38 0.26 0.5 3.43
- - - - - - - - - - - - - - - - - - - - - - - - - - 2.84 - - 4.51
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
- - - - - - - - - - - - - - - - - - - - - 3.2 - - - - - - - 4.38
- - - - - - - - - 1.24 - - - 1.03 - - - - - - - 2.48 - - - - - 2.25 - 3.93
- - - - - - - - - - - - - - - - - - - - - - - - - - - - 3.07 4.43
- -0.46 - - - - - - - - - - - -0.55 -0.67 - - -0.75 -0.46 - - - -0.7 -0.66 - - -0.76 - - 4.63
- - - - 3.17 - - - - - - - - - - - - - - - - - - - - - - - - 4.39
- - - -0.07 - - -1.6 - - - - - - 0.53 - - - 0.58 - - - - -1.65 - - - - - - 4.67
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
Spov3_chr5.00778 (cpHsc70-1)
-0.13 -0.79 -0.88 -1.7 -2.52 0.86 0.97 -1.75 -0.01 0.11 0.27 0.72 0.34 0.69 -0.83 -0.2 -0.29 -3.04 -0.57 -0.46 -0.39 -0.69 -1.26 -1.66 -1.12 -0.23 -0.52 -1.19 0.34 2.59
-2.15 -1.78 -2.15 -3.21 -2.48 -0.76 -0.62 -1.65 -3.53 -1.29 -0.55 -0.81 1.34 0.79 -0.65 -0.88 -2.22 1.64 -1.37 -0.42 -1.55 -0.27 0.7 -1.09 -1.7 -0.79 -1.28 -0.91 0.01 3.27
-20.08 - - - - - - - -15.96 - - - 2.42 - - - - - - - - - - - - -17.31 - - - 4.62
-0.48 -0.08 -0.01 0.46 0.1 -1.25 -0.81 -0.33 -0.53 -0.17 -0.39 -0.81 -0.46 -1.71 -0.56 -0.32 -0.78 -0.62 -0.22 0.06 -0.67 -0.33 -0.23 -0.82 0.23 -0.42 -0.31 0.56 0.07 2.69
- - - - - - - - - - 2.69 - - - - - - - - - - - - - - - - - - 4.56
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
- - - - 3.78 - - - - - - - - - - - - - - - - - - - - - - - - 4.03
Spov3_chr5.03941 (PICALM2a)
-0.2 -0.24 -0.46 0.46 -0.72 -0.56 -0.49 -0.18 -0.07 -0.11 0.2 -0.64 -0.01 -0.41 0.25 0.26 0.52 -0.92 -0.62 -0.21 -1.04 -0.33 -0.22 -0.66 -0.42 -0.36 0.01 -0.0 0.12 2.2
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
- - - - 0.96 - - - - - - - - - - - - - - - 1.4 - - - - - - - - 4.67
- -0.17 -0.25 -0.06 - -0.55 -0.85 -9.93 -0.82 -4.71 0.24 0.02 -0.23 0.27 - 0.69 - - - - -0.68 - -0.59 - 0.47 -0.76 - - 0.6 3.89
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
-2.16 - - - -1.48 -1.07 -0.53 -2.31 - -0.1 -2.5 -0.98 -2.42 1.09 - -2.49 -0.38 1.5 -0.76 -2.77 -0.49 - - -0.73 - -2.75 -1.65 - -2.27 4.14
-0.21 -0.39 -0.08 0.39 -2.19 0.5 -1.28 -1.93 -1.89 -0.79 -1.28 -1.09 -1.95 0.71 -0.16 -0.52 -0.66 -0.52 -0.87 -0.83 -0.98 -0.76 -0.7 -1.88 -2.94 -1.03 -2.37 -1.16 1.1 3.43
0.21 -0.01 0.1 -0.15 -0.39 1.01 0.03 -1.14 -0.59 -0.26 -0.47 -0.21 -1.41 1.08 0.17 -0.05 -0.5 -0.32 -0.09 -0.06 -0.46 -0.05 -0.69 -0.48 -1.31 -0.6 -1.04 -0.56 0.78 1.84
0.44 -0.04 0.16 0.21 -0.69 1.06 -0.15 -1.28 -0.98 -0.48 -1.07 -1.02 -1.87 1.13 0.09 -0.11 -0.62 -0.42 -0.78 -0.71 -1.05 -0.52 -0.82 -1.08 -2.05 -0.79 -1.51 -0.67 1.13 2.57
0.41 0.6 0.06 0.06 -0.18 0.22 0.46 -0.02 0.22 -0.12 -0.43 -0.45 -1.18 0.44 -0.86 -0.39 -0.92 0.38 -1.02 -0.35 -1.28 0.06 -0.97 -0.34 -0.43 0.01 -0.79 -0.32 0.45 1.87
- - - - - - - - 1.33 - - - 1.61 - - - - - 1.6 - - 1.2 1.38 - - - - 1.74 - 3.72
-1.21 0.82 -0.34 -1.03 1.63 -2.57 -2.6 -3.26 -3.18 1.09 -2.65 -2.54 -1.85 -3.37 -2.65 -3.74 -2.83 -0.76 -1.72 - -0.43 -0.53 - -1.06 -1.54 0.09 -0.14 0.39 1.63 3.34
0.26 -0.08 0.13 -0.13 -0.72 1.21 0.04 -0.92 -0.68 -0.28 -0.61 -0.51 -2.17 1.2 0.27 0.12 -0.21 -1.03 -0.58 -0.6 -0.78 -0.4 -0.64 -0.72 -1.57 -0.83 -1.38 -0.59 1.01 2.18
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
0.15 0.58 -0.52 -0.48 -0.73 -0.68 -0.9 -0.46 -0.56 -0.37 -0.13 -0.16 0.82 -0.56 -0.82 -0.54 -0.68 0.72 -0.4 -0.37 -0.28 -0.84 -0.13 -0.68 -0.93 -0.96 -1.05 -0.86 0.79 2.58
Spov3_chr6.02717 (AtHMP25)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
Spov3_chr6.03092 (EMB2788)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
- - - - - - - - - - - - - - - - - - - - - - - - - - 2.81 - - 4.52
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91
Spov3_S17.00008 (UGT76D1)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.91

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.