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  5. Bra008416

Bra008416 (GAPCP-1)


Aliases : GAPCP-1

Description : glyceraldehyde 3-phosphate dehydrogenase. EC_1.2 oxidoreductase acting on aldehyde or oxo group of donor


Gene families : OG0002955 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002955_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra008416
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_196


Type GO Term Name Evidence Source
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEA Interproscan
MF GO:0051287 NAD binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004478 methionine adenosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006334 nucleosome assembly IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015936 coenzyme A metabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0032993 protein-DNA complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034728 nucleosome organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044272 sulfur compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046500 S-adenosylmethionine metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0065004 protein-DNA complex assembly IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR020828 GlycerAld_3-P_DH_NAD(P)-bd 81 181
IPR020829 GlycerAld_3-P_DH_cat 234 391
No external refs found!