Spov3_C0166.00001 (CLS8, RNR1, DPD2, ATRNR1, R1)


Aliases : CLS8, RNR1, DPD2, ATRNR1, R1

Description : EC_1.17 oxidoreductase acting on CH or CH2 group. large subunit of ribonucleoside-diphosphate reductase heterodimer


Gene families : OG0000947 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000947_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_C0166.00001
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_77

Target Alias Description ECC score Gene Family Method Actions
Bra010689 CLS8, RNR1,... EC_1.17 oxidoreductase acting on CH or CH2 group. large... 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003677 DNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003678 DNA helicase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003682 chromatin binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003690 double-stranded DNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003883 CTP synthase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003887 DNA-directed DNA polymerase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003896 DNA primase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004146 dihydrofolate reductase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004386 helicase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004797 thymidine kinase activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005634 nucleus IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005664 nuclear origin of replication recognition complex IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005694 chromosome IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006270 DNA replication initiation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006275 regulation of DNA replication IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006281 DNA repair IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006298 mismatch repair IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006575 cellular modified amino acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006760 folic acid-containing compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006950 response to stress IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006974 DNA damage response IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006996 organelle organization IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008094 ATP-dependent activity, acting on DNA IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008168 methyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009058 biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009059 macromolecule biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016043 cellular component organization IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016740 transferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016779 nucleotidyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0018130 heterocycle biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019136 deoxynucleoside kinase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019205 nucleobase-containing compound kinase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019206 nucleoside kinase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019438 aromatic compound biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0030983 mismatched DNA binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032392 DNA geometric change IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032508 DNA duplex unwinding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0033554 cellular response to stress IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0034061 DNA polymerase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0042558 pteridine-containing compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0043226 organelle IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0043227 membrane-bounded organelle IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0043229 intracellular organelle IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0043231 intracellular membrane-bounded organelle IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044249 cellular biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0044877 protein-containing complex binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046653 tetrahydrofolate metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046654 tetrahydrofolate biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0048478 obsolete replication fork protection IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0050896 response to stimulus IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051052 regulation of DNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051276 chromosome organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051716 cellular response to stimulus IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071103 DNA conformation change IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071840 cellular component organization or biogenesis IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140097 catalytic activity, acting on DNA IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901362 organic cyclic compound biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901566 organonitrogen compound biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901576 organic substance biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR005144 ATP-cone_dom 1 89
IPR000788 RNR_lg_C 216 757
IPR013509 RNR_lsu_N 142 212
No external refs found!