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  5. Spov3_C0080.00006

Spov3_C0080.00006 (Obg A-2, CPSAR1,...)


Aliases : Obg A-2, CPSAR1, ATOBGL, OBGL, OBGC, EMB3138, EMB269, ATOBGC

Description : not classified


Gene families : OG0000097 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000097_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_C0080.00006
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0001.00026 No alias not classified 0.13 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0001.00046 No alias not classified 0.11 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0036.00011 No alias not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0052.00009 Obg A-2, CPSAR1,... not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_S09.00052 IRE1-2,... not classified 0.11 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.02683 No alias not classified 0.1 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04426 No alias not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.00038 ATTADA, TADA, TADA1 not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.01439 No alias not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.02722 GLI1, NHO1 not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.01648 No alias not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.04107 No alias not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.02809 No alias not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.02904 ATTADA, TADA, TADA1 not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0007010 cytoskeleton organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009262 deoxyribonucleotide metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016840 carbon-nitrogen lyase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016843 amine-lyase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016844 strictosidine synthase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032392 DNA geometric change IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032508 DNA duplex unwinding IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR025558 DUF4283 251 394
No external refs found!