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  5. Bra008353

Bra008353 (OSU1, TSD2, QUA2)


Aliases : OSU1, TSD2, QUA2

Description : pectin methyltransferase *(QUA2) involved in pectin-dependent cell adhesion


Gene families : OG0004375 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004375_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra008353
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_217

Target Alias Description ECC score Gene Family Method Actions
Bra035023 OSU1, TSD2, QUA2 pectin methyltransferase *(QUA2) involved in... 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006413 translational initiation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008135 translation factor activity, RNA binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008152 metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016567 protein ubiquitination IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016830 carbon-carbon lyase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019538 protein metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030247 polysaccharide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0045182 translation regulator activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140096 catalytic activity, acting on a protein IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR004159 Put_SAM_MeTrfase 171 676
No external refs found!