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  5. Spov3_C0056.00010

Spov3_C0056.00010 (AtSAP130a, SAP130a)


Aliases : AtSAP130a, SAP130a

Description : not classified


Gene families : OG0000270 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000270_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_C0056.00010
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr1.00714 AtSAP130a, SAP130a not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.01567 No alias not classified 0.1 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.02872 PPK1, AEL2, MLK4 not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.02873 FLIP not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04425 MTHSC70-2, HSC70-5 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.01172 AtSAP130a, SAP130a not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.01488 FLIP not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.02499 No alias not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006749 glutathione metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006751 glutathione catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0015936 coenzyme A metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016840 carbon-nitrogen lyase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016842 amidine-lyase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR004242 Transposase_21 243 453
No external refs found!