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Aliases : HCF208, CCB2
Description : not classified
Gene families : OG0000034 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000034_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Spinacia oleracea (Sol) PCC: Spov3_C0054.00019 | |
| Cluster | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_94 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Spov3_C0002.00012 | GSDA | FRS/FRF-type transcription factor | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0005.00030 | PAP25, ATPAP25 | FRS/FRF-type transcription factor | 0.11 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0005.00031 | ORTH4, VIM4 | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0034.00015 | No alias | not classified | 0.11 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0038.00005 | PAP25, ATPAP25 | FRS/FRF-type transcription factor | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0038.00006 | No alias | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.00328 | ORTH4, VIM4 | FRS/FRF-type transcription factor | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.01738 | SCRM, ICE1,... | FRS/FRF-type transcription factor | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.01845 | GSDA | FRS/FRF-type transcription factor | 0.14 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.01854 | PAP25, ATPAP25 | FRS/FRF-type transcription factor | 0.1 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.03937 | PAP25, ATPAP25 | FRS/FRF-type transcription factor | 0.11 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.00596 | ORTH4, VIM4 | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.01111 | ORTH4, VIM4 | FRS/FRF-type transcription factor | 0.11 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.01112 | TTL3, VIT | FRS/FRF-type transcription factor | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.01114 | PAP25, ATPAP25 | FRS/FRF-type transcription factor | 0.1 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.01535 | GSDA | FRS/FRF-type transcription factor | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.01536 | No alias | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.04069 | PAP25, ATPAP25 | FRS/FRF-type transcription factor | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.05005 | No alias | FRS/FRF-type transcription factor | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr4.00982 | PAP25, ATPAP25 | FRS/FRF-type transcription factor | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr4.04226 | ORTH4, VIM4 | FRS/FRF-type transcription factor | 0.11 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.00289 | ORTH4, VIM4 | FRS/FRF-type transcription factor | 0.12 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.00463 | ORTH4, VIM4 | FRS/FRF-type transcription factor | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.01730 | ORTH4, VIM4 | FRS/FRF-type transcription factor | 0.11 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.02482 | ORTH4, VIM4 | FRS/FRF-type transcription factor | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr6.01256 | GSDA | FRS/FRF-type transcription factor | 0.11 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr6.01959 | PAP25, ATPAP25 | FRS/FRF-type transcription factor | 0.15 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr6.02686 | No alias | FRS/FRF-type transcription factor | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001101 | response to acid chemical | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0009415 | response to water | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0009628 | response to abiotic stimulus | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0010035 | response to inorganic substance | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:1901700 | response to oxygen-containing compound | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:1902074 | response to salt | IEP | Spinacia oleracea GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |