1. Home
  2. Species
  3. Spinacia oleracea
  4. Sequence
  5. Spov3_C0030.00003

Spov3_C0030.00003 (FDM5)


Aliases : FDM5

Description : not classified


Gene families : OG0000598 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000598_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_C0030.00003
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_88

Target Alias Description ECC score Gene Family Method Actions
Spov3_S08.00052 RAB1C, ATRABD2C, ATRAB1C not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.00814 No alias not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.03006 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.02952 No alias not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.03435 PRP4KA not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006754 ATP biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009141 nucleoside triphosphate metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009260 ribonucleotide biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0015986 proton motive force-driven ATP synthesis IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046034 ATP metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046390 ribose phosphate biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0048038 quinone binding IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR026960 RVT-Znf 137 227
IPR002156 RNaseH_domain 353 474
No external refs found!