Spov3_C0010.00078 (H2AXB, HTA3, G-H2AX,...)

Aliases : H2AXB, HTA3, G-H2AX, GAMMA-H2AX

Description : histone *(H2A)

Gene families : OG0001486 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001486_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_C0010.00078
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_50

Target	Alias	Description	ECC score	Gene Family Method	Actions
Lsat_1_v5_gn_5_38140.1	H2AXA, G-H2AX,...	histone *(H2A)	0.02	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003682	chromatin binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006260	DNA replication	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006275	regulation of DNA replication	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016409	palmitoyltransferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051052	regulation of DNA metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR032454	Histone_H2A_C	99	130
IPR007125	Histone_H2A/H2B/H3	16	96

External Links

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