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  5. Spov3_C0006.00002

Spov3_C0006.00002 (CRK32)


Aliases : CRK32

Description : not classified


Gene families : OG0000006 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_C0006.00002
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0001.00104 No alias not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0022.00028 No alias not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0029.00027 MED13, GCT, MAB2 not classified 0.11 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0433.00003 ATCRE1, CRE1,... not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0761.00001 AtHip1, HIP1, TPR11 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_S01.00033 MED13, GCT, MAB2 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_S01.00135 No alias not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.04547 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.02947 WRKY27, ATWRKY27 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.02180 No alias not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.02794 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.01888 AtHip1, HIP1, TPR11 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.02907 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016072 rRNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0030684 preribosome IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0032040 small-subunit processome IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0034470 ncRNA processing IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0034660 ncRNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:1990904 ribonucleoprotein complex IEP Spinacia oleracea GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!