1. Home
  2. Species
  3. Spinacia oleracea
  4. Sequence
  5. Spov3_C0005.00088

Spov3_C0005.00088 (AGO3)


Aliases : AGO3

Description : siRNA-binding factor *(AGO2) of non-canonical RdDM pathway


Gene families : OG0062105 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_C0005.00088
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_131


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006643 membrane lipid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006665 sphingolipid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006672 ceramide metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009719 response to endogenous stimulus IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009725 response to hormone IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0010033 response to organic substance IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016491 oxidoreductase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0042221 response to chemical IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0046872 metal ion binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0051536 iron-sulfur cluster binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0051540 metal cluster binding IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003165 Piwi 697 995
IPR014811 ArgoL1 341 389
IPR032474 Argonaute_N 195 331
IPR003100 PAZ_dom 414 521
No external refs found!