Aliases : ASHR2, SDG39
Description : not classified
Gene families : OG0000102 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000102_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Spinacia oleracea (Sol) PCC: Spov3_C0005.00026 | |
Cluster | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_75 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Spov3_C0563.00001 | PAL2, ATPAL2 | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_S03.00015 | PAL2, ATPAL2 | not classified | 0.1 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_S10.00026 | AFT, AKR2, AKR2A | not classified | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr1.01280 | PAL2, ATPAL2 | not classified | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr1.02785 | PAL2, ATPAL2 | not classified | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr1.02863 | No alias | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr2.02137 | PAL2, ATPAL2 | not classified | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr2.02410 | DAR3 | not classified | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr2.02411 | AT14A | not classified | 0.1 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr2.02850 | GRC3 | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr2.03384 | bHLH13, bHLH013, JAM2 | not classified | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr3.02605 | No alias | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr5.04061 | PAL2, ATPAL2 | not classified | 0.1 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr6.02905 | PAL2, ATPAL2 | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005048 | signal sequence binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0006621 | protein retention in ER lumen | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0010333 | terpene synthase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0015074 | DNA integration | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0032507 | maintenance of protein location in cell | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0033218 | amide binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0035437 | maintenance of protein localization in endoplasmic reticulum | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0042277 | peptide binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0045185 | maintenance of protein location | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0046923 | ER retention sequence binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0051235 | maintenance of location | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0051651 | maintenance of location in cell | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0072595 | maintenance of protein localization in organelle | IEP | Spinacia oleracea GO terms from Neighborhoods |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR025558 | DUF4283 | 183 | 324 |
No external refs found! |