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Aliases : PDM3, EMB3140
Description : plastidial splicing factor *(PDM3)
Gene families : OG0019500 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Spinacia oleracea (Sol) PCC: Spov3_C0004.00149 | |
| Cluster | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_129 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0004325 | ferrochelatase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0004497 | monooxygenase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0004640 | phosphoribosylanthranilate isomerase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006568 | tryptophan metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006576 | biogenic amine metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006586 | indolalkylamine metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006783 | heme biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0009072 | aromatic amino acid metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0009308 | amine metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0010277 | chlorophyllide a oxygenase [overall] activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0010564 | regulation of cell cycle process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0016311 | dephosphorylation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016703 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0032954 | regulation of cytokinetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0032955 | regulation of division septum assembly | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0042168 | heme metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0042430 | indole-containing compound metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0042440 | pigment metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0044087 | regulation of cellular component biogenesis | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0046148 | pigment biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0051128 | regulation of cellular component organization | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0051301 | cell division | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0051726 | regulation of cell cycle | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:1901891 | regulation of cell septum assembly | IEP | Spinacia oleracea GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_rpt | 316 | 376 |
| IPR002885 | Pentatricopeptide_rpt | 540 | 563 |
| IPR002885 | Pentatricopeptide_rpt | 507 | 525 |
| IPR002885 | Pentatricopeptide_rpt | 577 | 601 |
| IPR002885 | Pentatricopeptide_rpt | 225 | 255 |
| IPR002885 | Pentatricopeptide_rpt | 470 | 496 |
| IPR002885 | Pentatricopeptide_rpt | 257 | 303 |
| IPR002885 | Pentatricopeptide_rpt | 398 | 441 |
| IPR002885 | Pentatricopeptide_rpt | 152 | 199 |
| No external refs found! |