Spov3_C0002.00198 (mCSF2)

Aliases : mCSF2

Description : not classified

Gene families : OG0000603 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000603_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_C0002.00198
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_6

Target	Alias	Description	ECC score	Gene Family Method	Actions
Spov3_chr1.00636	No alias	not classified	0.08	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.03981	No alias	not classified	0.05	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004519	endonuclease activity	None	Extended
MF	GO:0004521	RNA endonuclease activity	None	Extended
MF	GO:0004523	RNA-DNA hybrid ribonuclease activity	IEA	Interproscan
MF	GO:0004540	RNA nuclease activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016891	RNA endonuclease activity, producing 5'-phosphomonoesters	None	Extended
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0000278	mitotic cell cycle	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0000775	chromosome, centromeric region	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004673	protein histidine kinase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005092	GDP-dissociation inhibitor activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0007049	cell cycle	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0007165	signal transduction	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0007264	small GTPase mediated signal transduction	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0035556	intracellular signal transduction	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0048364	root development	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0048367	shoot system development	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0048731	system development	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0098687	chromosomal region	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0099402	plant organ development	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0140299	small molecule sensor activity	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002156	RNaseH_domain	1418	1538
IPR025836	Zn_knuckle_CX2CX4HX4C	62	93
IPR026960	RVT-Znf	1218	1307
IPR025558	DUF4283	2	49

External Links

No external refs found!