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  5. Spov3_C0001.00213

Spov3_C0001.00213 (EDR2)


Aliases : EDR2

Description : not classified


Gene families : OG0005726 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0005726_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_C0001.00213
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_46

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr1.01534 EDR2 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.03721 EDR2 not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEA Interproscan
MF GO:0008289 lipid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR009769 EDR2_C 689 743
IPR002913 START_lipid-bd_dom 404 554
IPR002156 RNaseH_domain 1126 1245
IPR041588 Integrase_H2C2 1336 1393
No external refs found!