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Aliases : PICALM5B
Description : not classified
Gene families : OG0000064 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000064_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Spinacia oleracea (Sol) PCC: Spov3_C0001.00165 | |
| Cluster | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_36 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Spov3_C0006.00006 | ATEXO70D2, EXO70D2 | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0011.00034 | emb1579, RSA1 | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_S01.00103 | VAL3 | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.01307 | No alias | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.01731 | No alias | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.02338 | TTL3, VIT | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr6.02387 | No alias | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006605 | protein targeting | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006612 | protein targeting to membrane | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006886 | intracellular protein transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0008312 | 7S RNA binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0033365 | protein localization to organelle | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0045047 | protein targeting to ER | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0048500 | signal recognition particle | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0051668 | localization within membrane | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0072657 | protein localization to membrane | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Spinacia oleracea GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR019557 | AminoTfrase-like_pln_mobile | 64 | 202 |
| No external refs found! |