Lsat_1_v5_gn_9_99560.1 (ABCG10)

Aliases : ABCG10

Description : cargo receptor protein *(ATI3). subfamily ABCG transporter

Gene families : OG0034750 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_9_99560.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_68

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003743	translation initiation factor activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006413	translational initiation	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008135	translation factor activity, RNA binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009719	response to endogenous stimulus	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009725	response to hormone	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009733	response to auxin	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010033	response to organic substance	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016409	palmitoyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0019829	ATPase-coupled monoatomic cation transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0022853	active monoatomic ion transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0033179	proton-transporting V-type ATPase, V0 domain	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0042221	response to chemical	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0042625	ATPase-coupled ion transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0044769	ATPase activity, coupled to transmembrane movement of ions, rotational mechanism	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0045182	translation regulator activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0046961	proton-transporting ATPase activity, rotational mechanism	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0050896	response to stimulus	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1902600	proton transmembrane transport	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR013525	ABC2_TM	325	536
IPR003439	ABC_transporter-like_ATP-bd	54	204

External Links

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Lsat_1_v5_gn_9_99560.1 (ABCG10)

Expression Profile

Co-expression Networks

Functional Annotation