1. Home
  2. Species
  3. Lactuca sativa
  4. Sequence
  5. Lsat_1_v5_gn_9_7981.1

Lsat_1_v5_gn_9_7981.1 (AtD27, D27)


Aliases : AtD27, D27

Description : carotenoid isomerase *(DWARF27)


Gene families : OG0036076 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_9_7981.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_76


Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005507 copper ion binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006720 isoprenoid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006721 terpenoid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008033 tRNA processing IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008131 primary amine oxidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008170 N-methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008173 RNA methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008175 tRNA methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008299 isoprenoid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009308 amine metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016114 terpenoid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016744 transketolase or transaldolase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034470 ncRNA processing IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0048038 quinone binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0051213 dioxygenase activity IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR025114 D27-like_C 162 243
No external refs found!