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  5. Lsat_1_v5_gn_9_73420.1

Lsat_1_v5_gn_9_73420.1


Description : not classified


Gene families : OG0000121 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_9_73420.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_242


Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004827 proline-tRNA ligase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005319 lipid transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005737 cytoplasm IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006433 prolyl-tRNA aminoacylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006869 lipid transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0061024 membrane organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0120009 intermembrane lipid transfer IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0120013 lipid transfer activity IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001680 WD40_rpt 120 158
IPR001680 WD40_rpt 163 199
IPR006103 Glyco_hydro_2_cat 345 400
No external refs found!