Bra007920 (KNAT2, ATK1)

Aliases : KNAT2, ATK1

Description : KNOX-type transcription factor

Gene families : OG0021634 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra007920
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_102

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004860	protein kinase inhibitor activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004861	cyclin-dependent protein serine/threonine kinase inhibitor activity	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0005694	chromosome	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006260	DNA replication	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0007059	chromosome segregation	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0019207	kinase regulator activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0019210	kinase inhibitor activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0019887	protein kinase regulator activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0022402	cell cycle process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0030291	protein serine/threonine kinase inhibitor activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051301	cell division	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051726	regulation of cell cycle	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR005541	KNOX2	136	182
IPR005539	ELK_dom	224	245
IPR008422	Homeobox_KN_domain	264	303
IPR005540	KNOX1	83	124

External Links

No external refs found!

Bra007920 (KNAT2, ATK1)

Expression Profile

Co-expression Networks

Functional Annotation