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Description : not classified
Gene families : OG0000043 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000043_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_9_66700.1 | |
| Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_101 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Lsat_1_v5_gn_0_26720.1 | Tudor1, TSN1, AtTudor1 | mRNA endoribonuclease *(TSN) | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Lsat_1_v5_gn_3_125721.1 | LST8-1 | regulatory component *(LST8) of TORC complex | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Lsat_1_v5_gn_4_12620.1 | LST8-1 | not classified | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Lsat_1_v5_gn_5_86001.1 | No alias | not classified | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004175 | endopeptidase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004176 | ATP-dependent peptidase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004417 | hydroxyethylthiazole kinase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006508 | proteolysis | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006766 | vitamin metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006772 | thiamine metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008233 | peptidase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008236 | serine-type peptidase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009228 | thiamine biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016787 | hydrolase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0017171 | serine hydrolase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0030126 | COPI vesicle coat | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0030163 | protein catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0034308 | primary alcohol metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0034309 | primary alcohol biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0042723 | thiamine-containing compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0042724 | thiamine-containing compound biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0046165 | alcohol biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |