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  5. Bra000789

Bra000789 (osca1, OSCA1.1)


Aliases : osca1, OSCA1.1

Description : calcium-permeable channel *(OSCA)


Gene families : OG0008014 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra000789
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_34


Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004134 4-alpha-glucanotransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004518 nuclease activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005215 transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005319 lipid transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0005975 carbohydrate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006869 lipid transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008184 glycogen phosphorylase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0010181 FMN binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015399 primary active transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Brassica rapa GO terms from Neighborhoods
BP GO:0017004 cytochrome complex assembly IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019321 pentose metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019566 arabinose metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0022804 active transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0022834 ligand-gated channel activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030118 clathrin coat IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030125 clathrin vesicle coat IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030132 clathrin coat of coated pit IEP Brassica rapa GO terms from Neighborhoods
MF GO:0031625 ubiquitin protein ligase binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0044389 ubiquitin-like protein ligase binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046373 L-arabinose metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0061024 membrane organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0120009 intermembrane lipid transfer IEP Brassica rapa GO terms from Neighborhoods
MF GO:0120013 lipid transfer activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140359 ABC-type transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:2001070 starch binding IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003864 CSC1/OSCA1-like_7TM 370 642
IPR032880 Csc1/OSCA1-like_N 7 175
IPR027815 CSC1/OSCA1-like_cyt 196 359
No external refs found!