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  5. Lsat_1_v5_gn_9_65900.1

Lsat_1_v5_gn_9_65900.1 (AtABCA9, ATATH11, ATH11, ABCA9)


Aliases : AtABCA9, ATATH11, ATH11, ABCA9

Description : MADS/AGL-type transcription factor


Gene families : OG0035159 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_9_65900.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_2


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005856 cytoskeleton IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005885 Arp2/3 protein complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006468 protein phosphorylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0007015 actin filament organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009733 response to auxin IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016301 kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016310 phosphorylation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0045010 actin nucleation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0097435 supramolecular fiber organization IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 11 54
No external refs found!