Heatmap: Cluster_2 (Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

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(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
-1.63 -1.94 -3.15 -2.55 1.27 0.88 -0.82 -2.27 -1.99 -1.29 -2.15 -1.6 -0.73 0.43 0.79 -0.69 -1.53 3.09 -0.45 -0.7 -0.85 -2.19 2.51 -2.32 -1.8 -0.31 -1.78 -1.13 -1.06 -1.5 -4.95
- - - - - - - - - - - - - - - - - 4.21 - - 1.22 - 3.35 - - - - - - - -
- - - - - - - - - - - - - - - - - 3.86 - - - - 4.05 - - - - - - - -
- - - - -0.3 - - - - - - -3.32 -1.99 - - -3.03 - 4.14 - - - - 3.55 - -1.62 - - - - - -3.25
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- - - - - - - 1.17 - - - - 0.21 1.33 - - - 3.66 - - - - 3.63 - - - - - - - -
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- - - - - - - - - - - - - - - 1.44 - 4.25 - - - 2.05 1.72 - - - -0.06 - - - -0.32
- - - - - - - - - - - - - - - - - 4.49 - - - - 2.82 - - - - - - 0.48 -
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- - - - -1.43 0.82 - - - - - - -0.3 - - - - 3.91 - - - - 3.52 - - - - -1.4 - 0.21 -
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-0.03 0.51 -0.25 -0.8 1.06 -0.02 -0.98 -1.07 -0.54 -0.74 -0.51 -1.15 -0.44 0.17 0.33 -0.71 -1.12 2.43 -0.78 -0.82 -1.21 -1.06 2.04 -1.17 -1.01 -0.88 -0.6 -1.07 -0.29 -0.39 -0.48
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- - - - - -1.98 - - - - - - -0.83 0.4 - - - 3.35 - - - - 4.14 -0.48 - - - -1.84 - - -
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-3.01 -0.59 -3.05 -5.0 -1.68 -1.64 -7.14 -7.01 -3.72 -6.27 -4.83 -7.1 -3.33 -2.83 -2.25 -3.34 -5.62 4.13 -4.93 -4.05 -5.43 -5.0 3.38 -3.89 -2.87 -2.99 -3.96 -4.96 -5.09 -2.71 -5.2
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- - - - 2.78 - 3.17 - - - - - - - 3.92 - - - - - - - - - - - - - - - -
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- - - - - - - - - - - - - - - - - 4.5 - - - - 3.07 - - - - - - - -
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-2.6 -2.96 -4.01 -4.18 -1.22 -2.38 -3.95 - - -6.62 -5.17 -6.7 -2.87 -2.25 -0.16 -4.33 -5.2 3.77 -2.31 -5.36 -3.7 -3.69 3.73 -1.28 -1.36 -4.81 -3.36 -2.25 -7.61 -4.27 -5.42
- - - - - - - -0.61 - -0.92 - -0.66 - - - - - 4.38 -0.04 - - - 2.45 - -0.8 - - - - 0.42 -
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-0.41 -0.32 -0.78 -1.28 -0.4 -0.19 -0.08 -0.03 -0.77 -0.74 -0.73 -0.51 0.44 -0.07 -0.02 0.16 0.23 2.0 -0.14 -0.13 -0.11 -0.2 0.99 -0.15 -0.13 -0.14 -0.09 -0.01 -0.28 -0.31 -0.12
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-1.69 -1.62 -1.82 -1.68 -0.8 -1.11 -0.64 0.07 -2.28 -2.31 -2.13 -2.25 -1.78 -0.47 -0.39 -1.24 -1.72 3.09 -1.49 -1.71 -1.61 -1.57 3.52 -1.9 -1.39 -1.26 -1.67 -1.68 -2.05 -1.94 -2.28
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-0.54 -0.87 -1.21 -0.98 1.03 0.17 -0.27 -0.97 -0.64 -0.49 -0.64 -0.37 0.66 -0.25 1.14 -0.22 -0.2 2.09 0.19 0.17 -0.74 -0.55 0.32 -0.24 -0.42 -0.42 -0.39 -0.45 -0.8 -0.43 -0.02
-2.76 -2.11 -4.49 -5.59 1.49 1.0 -4.55 -2.95 -2.44 -2.86 -2.41 -3.24 -0.68 0.26 2.49 -2.0 -3.08 3.6 -0.61 -1.53 -1.65 -1.71 -0.73 -0.98 -0.87 -2.99 -1.75 -2.92 -2.58 -0.27 -2.14
-1.68 -2.07 -3.29 -4.4 1.76 0.72 -3.92 -4.25 -3.32 -3.71 -2.92 -3.64 -0.11 1.74 2.04 -2.12 -3.41 2.99 -0.4 -2.65 -1.94 -2.36 2.23 -2.04 -1.72 -2.55 -1.89 -2.04 -2.26 -1.0 -2.97
-3.89 -2.61 -3.64 -5.65 0.3 -0.2 -5.28 -5.11 -5.62 -4.89 -3.97 -4.58 -1.08 0.78 1.51 -3.57 -4.47 3.81 -1.12 -4.03 -2.72 -3.27 2.86 -1.94 -2.93 -4.79 -3.05 -3.8 -2.58 -2.03 -3.83
-3.23 -4.04 - - 1.07 -0.26 -3.95 -3.94 -2.86 -4.63 -3.89 -3.11 -0.93 -0.21 0.32 -3.38 -2.37 3.7 -1.16 -2.27 -1.13 -1.7 3.06 -1.28 -1.24 -2.86 -1.92 -3.3 -3.31 -1.89 -4.71
-1.23 -0.33 -1.91 - 1.1 1.07 -2.22 -2.26 -1.96 -2.7 -2.5 -6.16 1.12 0.22 0.52 -0.89 -4.03 3.45 -0.93 -1.99 -1.94 -1.29 1.55 -1.87 -1.68 -0.24 -0.78 -1.03 -2.55 -0.82 -1.72
-2.57 0.15 -2.34 -2.87 1.28 -0.8 -3.2 -3.41 -2.52 -2.48 -2.3 -2.38 -0.57 0.21 0.19 -2.28 -2.27 2.98 -1.62 -2.31 -2.17 -1.71 3.52 -1.87 -2.89 -2.89 -2.01 -2.62 -2.24 -1.82 -2.4
-0.75 -0.5 -1.89 -1.11 1.89 0.5 -2.29 -1.68 -1.34 -1.43 -0.65 -1.61 -1.23 0.82 1.02 -0.56 -1.75 2.41 -0.32 -1.5 -1.06 -1.08 2.21 -1.02 -1.06 -1.74 -0.81 -0.91 -0.93 -0.17 -0.78
-0.61 -0.44 -1.96 -1.95 1.86 0.15 -1.93 -2.91 -2.18 -2.36 -1.92 -2.48 -1.31 1.62 1.19 -1.34 -1.9 3.05 -0.82 -1.9 -1.89 -1.63 2.31 -2.23 -2.51 -2.56 -1.77 -2.17 -0.86 -2.21 -2.36
-0.77 0.04 -1.0 -0.87 0.25 -0.0 -0.43 -0.67 -0.67 -0.67 -0.45 -0.24 -0.1 0.68 0.46 -0.05 -0.16 2.27 -0.45 -0.46 -0.23 -0.4 0.88 -0.67 -0.46 -0.29 -0.25 -0.57 -0.41 -0.16 0.12
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-1.28 - - -1.31 -1.93 - - - - - - - 0.49 -0.39 -1.46 -1.41 -1.47 2.63 0.71 - - 0.2 3.76 - - - - -0.64 -0.65 -0.76 1.2
-4.34 -2.15 -3.09 - -2.98 -2.56 -3.3 -2.94 -5.83 -5.76 - - -2.27 -1.13 -2.25 -3.93 -4.7 3.39 -1.98 -3.59 -1.73 -4.45 4.08 -4.8 -2.62 -2.5 -5.58 -4.2 -1.92 -2.4 -2.95
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- - - - 0.22 -0.21 - - - - - - - -0.67 - - - 4.35 -1.28 - -1.34 -3.08 2.45 0.24 -1.7 - - -3.45 - - -
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-0.43 -0.15 -1.67 -2.24 1.2 0.63 -2.66 -2.82 -1.96 -2.17 -1.52 -2.03 -0.96 0.5 1.18 -1.69 -2.33 3.11 -1.53 -2.14 -1.39 -1.9 2.72 -1.8 -1.68 -1.99 -1.91 -1.9 -0.92 -1.57 -2.06
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- - - - - - - - - - - - - - - - - 3.24 - - - - 4.43 - - - - - - - -
- -1.19 -1.28 -3.25 -0.16 0.45 -1.1 -1.42 -0.17 - -1.94 -0.22 -0.15 -0.83 -0.84 -0.1 -1.13 3.6 -2.02 -0.31 -2.2 -3.47 1.48 -0.7 -2.11 -1.09 -0.1 -2.17 -0.45 -0.8 0.56
-2.14 -1.9 -1.42 -1.19 0.78 0.18 -0.15 -0.66 -0.14 -0.51 -0.77 -0.14 0.67 0.6 1.37 -0.65 0.53 1.71 0.45 -0.21 -0.11 0.14 -1.36 -1.09 0.05 -0.53 0.13 -0.41 -0.6 0.0 -0.32
- -3.72 - -3.35 -1.25 -2.14 -3.05 - - -3.23 -2.2 -5.89 -1.0 -0.49 -1.31 -4.43 -3.39 3.76 -4.63 -2.54 -3.03 - 3.66 -3.24 -3.12 -3.96 -3.24 -5.63 -4.14 -2.29 -0.35
-2.11 - - - 0.12 -0.46 -2.49 - -2.35 -3.58 - -1.16 0.19 1.46 2.36 - -1.72 3.01 -1.81 -0.81 - -3.54 2.49 -2.56 -2.46 -1.59 -2.33 -1.41 -1.5 0.64 -0.08
- - - - - - - - - - - - - - - - - 3.42 - - - - 4.34 - - - - - - - -
- - - - - - - - - - - - - - 0.45 0.48 - 4.33 - - - - 3.03 - - - - - - - -
- - - - - - - - - - - - -1.77 - - - - 4.63 - - -1.07 - 2.3 - - - - - - - -1.05
-1.38 -0.09 -2.25 -5.76 1.5 0.78 -2.49 -2.92 -1.92 -2.25 -1.67 -3.66 0.28 0.97 0.19 -1.13 -2.31 3.48 -0.09 -1.6 -2.22 -1.48 1.45 -1.27 -1.87 -1.3 -1.55 -1.98 -1.26 -0.71 -1.59
0.03 0.23 -0.85 -0.89 1.39 -0.35 -1.69 -1.91 -1.13 -1.18 -1.26 -1.28 -0.57 0.05 0.36 -0.99 -1.43 2.86 -0.98 -1.62 -1.28 -1.33 2.55 -1.45 -1.37 -1.29 -1.44 -1.26 -1.18 -0.96 -1.05
- - - - - - - - - - - - - - - - - 3.85 - - - - 4.05 - - - - - - - -
-0.63 -1.21 -1.58 -1.7 1.11 0.48 -0.61 -0.64 -1.3 -1.32 -0.84 -0.95 -0.09 0.49 0.41 -1.04 -0.79 2.73 -0.79 -0.92 -0.72 -0.77 2.17 -0.35 -0.97 -0.93 -0.5 -0.51 -1.78 -1.54 -0.9
- - - - - - - - - - - - -1.34 - - - - 4.27 - - -1.54 - 3.45 - - - - - - - -
-0.88 -1.06 -0.99 -0.76 0.7 -0.07 -0.88 -0.68 -0.94 -0.78 -0.97 -0.85 -1.34 0.42 0.79 -0.55 -1.11 2.71 -0.46 -0.87 -0.93 -0.88 2.07 -1.01 -1.21 -0.93 -0.82 -0.89 -0.13 -0.23 -0.08
- - - - - - - - - - - - - - - - - 3.75 - - - - 4.13 - - - - - - - -
-0.61 0.26 -1.86 -1.77 1.06 0.88 -0.68 0.19 -1.3 -1.49 -0.93 -1.14 -0.41 0.92 0.53 -0.61 -1.11 2.57 -0.65 -1.38 -1.21 -1.15 1.8 -0.96 -0.79 -1.04 -0.79 -1.36 -0.44 -0.53 -0.64
Lsat_1_v5_gn_9_67221.1 (ELONGATION FACTOR-TU FAMILY)
- - - - - - - - - - - - - - - - - 2.38 - - - - 4.33 - 2.52 - - - - - -
-0.9 -0.33 -1.1 -1.16 0.4 0.25 -0.48 -0.21 -1.35 -1.43 -0.87 -1.38 -0.26 0.99 1.11 -0.39 -1.07 2.79 -0.35 -1.1 -0.89 -0.78 1.26 -1.02 -0.83 -0.77 -0.42 -0.92 -0.42 -0.85 -0.26
- - - - 0.52 - - - - - - - - - 3.39 - - 3.53 - - - - 2.55 - 0.75 - - - - - -
-1.24 -0.51 -0.53 -0.52 0.22 -0.02 -1.21 -1.74 -1.55 -1.92 -1.64 -1.59 0.5 0.46 -0.24 -0.81 -0.28 2.14 -1.2 -1.85 -0.79 -1.47 3.29 -0.61 -2.02 -1.36 -0.84 -0.66 -1.32 -1.35 -2.01
-1.64 -2.87 -2.91 -3.5 -0.55 -1.24 -2.19 -1.59 -2.17 -5.49 -2.46 -2.83 -1.3 0.15 -0.11 -1.73 -2.77 3.68 -2.16 -2.26 -2.16 -1.25 3.1 -1.81 -1.78 -1.89 -1.28 -2.46 -1.02 -0.71 -2.07
-1.74 -3.26 -2.63 -6.14 -0.51 -0.51 -0.61 -2.44 0.38 0.21 0.4 0.55 -1.03 0.86 1.32 0.05 0.49 1.81 -0.11 0.54 0.43 0.4 -2.43 -0.2 -0.21 0.4 0.32 -0.23 -0.86 -0.37 -1.11

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.