1. Home
  2. Species
  3. Lactuca sativa
  4. Sequence
  5. Lsat_1_v5_gn_9_58440.1

Lsat_1_v5_gn_9_58440.1


Description : not classified


Gene families : OG0000139 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000139_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_9_58440.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_145

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_1_95260.1 AtRH20, RH20 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_7_76221.1 ATBET10, GTE11, BET10 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_8_88460.1 GEM1, MOR1 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004176 ATP-dependent peptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004252 serine-type endopeptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004527 exonuclease activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004784 superoxide dismutase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006413 translational initiation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006801 superoxide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006820 monoatomic anion transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008135 translation factor activity, RNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0045182 translation regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072593 reactive oxygen species metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Lactuca Sativa GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!