Lsat_1_v5_gn_9_53960.1 (DREB1C, CBF2, ATCBF2, FTQ4)

Aliases : DREB1C, CBF2, ATCBF2, FTQ4

Description : transcription factor *(CBF/DREB1). subgroup ERF-III transcription factor

Gene families : OG0000813 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000813_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_9_53960.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_25

Target	Alias	Description	ECC score	Gene Family Method	Actions
Lsat_1_v5_gn_9_54860.1	CBF4, DREB1D	transcription factor *(CBF/DREB1). subgroup ERF-III...	0.01	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004601	peroxidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005509	calcium ion binding	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005576	extracellular region	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005618	cell wall	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0005975	carbohydrate metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006073	obsolete cellular glucan metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006665	sphingolipid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006672	ceramide metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006979	response to oxidative stress	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010215	cellulose microfibril organization	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016567	protein ubiquitination	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016740	transferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016755	aminoacyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016757	glycosyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016758	hexosyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0020037	heme binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0030198	extracellular matrix organization	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0030312	external encapsulating structure	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0032446	protein modification by small protein conjugation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043062	extracellular structure organization	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0045229	external encapsulating structure organization	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0046527	glucosyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0048046	apoplast	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	66	116

External Links

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Lsat_1_v5_gn_9_53960.1 (DREB1C, CBF2, ATCBF2, FTQ4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation