- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : RIN2
Description : E3 ubiquitin ligase *(RIN)
Gene families : OG0000258 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000258_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_9_52140.1 | |
| Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_106 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000226 | microtubule cytoskeleton organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0000272 | polysaccharide catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0001522 | pseudouridine synthesis | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003676 | nucleic acid binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003993 | acid phosphatase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005488 | binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0005875 | microtubule associated complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006414 | translational elongation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0007010 | cytoskeleton organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0007051 | spindle organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008131 | primary amine oxidase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0015020 | glucuronosyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016160 | amylase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016161 | beta-amylase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016641 | oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016791 | phosphatase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0022402 | cell cycle process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051225 | spindle assembly | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0070652 | HAUS complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0070925 | organelle assembly | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0071949 | FAD binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0140694 | non-membrane-bounded organelle assembly | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 324 | 368 |
| No external refs found! |