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  5. Lsat_1_v5_gn_9_51401.1

Lsat_1_v5_gn_9_51401.1 (TAF11)


Aliases : TAF11

Description : not classified


Gene families : OG0000687 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000687_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_9_51401.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_56

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_9_51301.1 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004784 superoxide dismutase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006801 superoxide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008184 glycogen phosphorylase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016790 thiolester hydrolase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072593 reactive oxygen species metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001810 F-box_dom 14 49
No external refs found!